I have used a couple of different methods for keeping things sorted out and organized. Some of the little plastic Storage boxes with the pull out drawers works pretty well and are about 4-5 fun dollars a piece. The boxes will hold a gang of Jigs per a drawer and can be labeld as well and the see thru fronts on the drawers make it easy to find what your looking for. I find these to be easier and sometimes cheaper than the plano tackle boxes.
For a tackle bag I use the small wallet type worm bags. In one thasts about the size of a 3 x 5 index card I can easily carry a good 200 jigs to get me through and outing on the water. I figure thats more than enough to last me out on the water and if I loose that many jigs then I am probably past my point of productivity and ready to head back to shore.