If you can swing it, I'd put another battery up front, or in back, for the electronics and wire your two current batteries as 24 or 12 volt. This will also eliminate interference of the trolling motor on your other electronic devices. Leave the two bank hooked to your trolling motor batteries and use a portable battery charger to top off the third battery. I wasn't aware they made 12 volt trolling motors. I only was aware or 24 volt or 36 volt trolling motors.